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| 2018 | 2019 | 2020 | 2021 | 2022 | 2023 | 2024 | 2025 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
bio is used at run time in 117 crates. It is a direct run-time dependency in 100 crates. It's used only as a dev dependency in 9 crates.
| Number of dependers | bio version | Downloads/month |
|---|---|---|
| 37 | 2.2.0 | 12K |
| 48 | 1.6.0 | 5.1K |
| 1 | 0.42.0 | 290 |
| 7 | 0.41.0 | 460 |
| 1 | 0.40.0 | 29 |
| 2 | 0.39.2 | 160 |
| 3 | 0.37.1 | 110 |
| 1 | 0.35.0 | 7 |
| 1 | 0.33.0 | 160 |
| 5 | 0.32.0 | 350 |
| 3 | 0.31.0 | 110 |
| 4 | 0.30.1 | 220 |
| 2 | 0.25.0 | 140 |
| 1 | 0.24.0 | 0 |
| 6 | 0.20.3 | 25 |
| 1 | 0.14.2 | 11 |
| 3 | 0.9.0 | 4 |
| Depender (with downloads and own rev deps) | bio version | |||
|---|---|---|---|---|
| 1.8K | stats_on_gff3_ncbi | ^1.5.0 | ||
| 1.6K | fakit | ^1.5.0 | ||
| 1.1K | 5 | gskits | ^2.0.3 | |
| 800 | haptk | ^2.0 | ||
| 750 | seq-here | ^2.2.0 | ||
| 750 | ebiotic | ^1.5 | ||
| 480 | 3 | mm2 | ^1.6.0 | |
| 390 | tidk | ^2.0.3 | ||
| 380 | 1 | varlociraptor | ^2.0.0 | |
| 360 | 2 | hgvs | ^2.0 | |
| 320 | stats_on_gff3 | ^1.2.0 | ||
| 270 | 1 | lt-fm-index | ^1.1.0 | |
| 230 | isONclust3 | ^1 | ||
| 210 | 2 | annonars | ^2.0.3 | |
| 210 | fqcat | ^1.4.0 | ||
| 180 | mmft | ^2.0.3 | ||
| 170 | 1 | mehari | ^2.0.3 | |
| 160 | microBioRust | ^0.37.1 | ||
| 140 | varfish-server-worker | ^2.0 | ||
| 130 | 1 | intspan | ^0.30.1 | |
| 120 | fqkit | ^2.2.0 | ||
| 110 | fq-filter-reads | ^1.1.0 | ||
| 100 | biotools | ^2.0.3 | ||
| 100 | gdrs | ^1.5.0 | ||
| rustybam | ^1.3 | |||
| fasta-stats | ^2 | |||
| gffkit | ^1.6.0 | |||
| scattr | ^1.5.0 | |||
| 1 | consprob-trained | ^1.1 | ||
| 2 | skani | ^1 | ||
| codonrs | ^2.0.3 | |||
| seqdupes | ^1.6.0 | |||
| 3 | genome-graph | ^2.0.3 | ||
| fasta_split | ^1.5.0 | |||
| prole | ^1.4.0 | |||
| motif_finder | ^1.3.0 | |||
| mudskipper | ^0.39.1 | |||
| bigwig2bam | ^1.1.0 | |||
| 2 | phyloprob | ^0.20 | ||
| rboss | ^1.5.0 | |||
| pdbvis | ^1.1 | |||
| cytos | ^1.4.0 | |||
| fibertools-rs | ^1.2.0 | |||
| perbase | ^0.41 | |||
| yacrd | ^0.31 | |||
| 1 | phylofold | ^0.20 | ||
| kgst | ^1.3.1 | |||
| sabreur | ^0.41 | |||
| 1 | rnafamprob | ^0.20 | ||
| prll-ri | ^0.9 | |||
| biodiff | ^1.6.0 | |||
| crast | ^0.9 | |||
| fmlrc | ^0.31.0 | |||
| hyperex | ^0.35 | |||
| strif | ^1.1.0 | |||
| Fastatsplit | ^2.0.3 | |||
| predictosaurus | ^2.0.3 | |||
| tarnished | ^1.1.0 | |||
| phyloalifold | ^0.20 | |||
| sumi | ^1.1.0 | |||
| conshomfold | ^0.20 | |||
| fasta_windows | ^0.41.0 | |||
| gff_diff | ^0.32 | |||
| alignoth | ^2.0.3 | |||
| 1 | cpr | ^0.9 | ||
| ncbitaxonomy | ~0.25 | |||
| alpaca | >=0.3.7 | |||
| 1 | coverm | ^1.1.0 | ||
| fastq-count | ^0.25 | |||
| lorikeet-rs | ^0.30 | |||
| rustynuc | ^0.30.1 | |||
| neofold | ^0.20 | |||
| seqsplitter | ^0.41.0 | |||
| orthanq | ^0.41.0 | |||
| sars | ^0.41 | |||
| seqsample | ^0.41.0 | |||
| filter_cigars | ^0.31 | |||
| libprosic | ^0.24 | |||
| plascad | ^2.0.1 | |||
| clstr | ^2.0.3 | |||
| maelstrom-core | ^0.42 | |||
| 4 | rna-algos | ^1.1 | ||
| bedblocks | ^1.6.0 | |||
| chordclust | ^0.32.0 | |||
| righor | ^1.5 | |||
| rust-bio-tools | ^0.39 | |||
| 1 | bsxplorer2 | ^2.0.3 | ||
| 3 | consprob | ^1.1 | ||
| homopolymer-compress | ^0.40.0 | |||
| nons | 0.14.* | |||
| seqsizzle | >=1 | |||
| ehxacto | ^1.6.0 | |||
| fasta-filter | ^2 | |||
| fg-stitch-lib | ^1.1.0 | |||
| lorikeet-genome | ^1.1 | |||
| microBioRust-microSeqIO | ^0.37.1 | |||
| pyin-rs | ^2.0.3 | |||
| readmerger | ^1.4.0 | |||
| stats_on_genomes | ^1.2.0 | |||
| biodiff-align | optional | ^1.6.0 | ||
| 9.3K | 60 | needletail | dev | ^1 |
| 2.8K | 35 | seq_io | dev | ^2.2 |
| 500 | 5 | fastq | dev | >=0.10 |
| block-aligner | dev | ^0.33 | ||
| 2 | deepbiop-fa | dev | ^2.0 | |
| 3 | deepbiop-fq | dev | ^2.0 | |
| 3 | deepbiop-core | dev | ^2.0 | |
| 2 | deepbiop-bam | dev | ^2.0 | |
| elias_fano_rust | dev | ^0.32.0 | ||