#protein #pdb #3d #bioinformatics

app pdbvis

A 3D protein structure viewer that loads and visualizes proteins from the Protein Data Bank (PDB)

3 releases

0.1.2 Nov 13, 2024
0.1.1 Nov 13, 2024
0.1.0 Nov 12, 2024

#81 in Biology

Download history 278/week @ 2024-11-08 69/week @ 2024-11-15 10/week @ 2024-11-22 1/week @ 2024-11-29 2/week @ 2024-12-06

145 downloads per month

MIT license

30KB
349 lines

pdbvis

A high-performance 3D molecular visualization tool for rendering and analyzing protein structures from the Protein Data Bank (PDB).

Overview

pdbvis provides real-time, interactive visualization of protein structures with multiple representation modes and intuitive camera controls. The application emphasizes efficiency and ease-of-use while maintaining scientific accuracy.

Installation

cargo install pdbvis

Usage

# Visualize a protein structure
pdbvis --pdb-id 8KEX

# Get help
pdbvis --help

Controls

Use the ; key to toggle between backbone and cartoon view modes. Drag with the mouse to rotate the view, right-click + drag to pan, and use the mouse wheel to zoom in and out.

Dependencies

~31–46MB
~726K SLoC