12 breaking releases

0.14.0 Jun 10, 2024
0.13.1 Mar 23, 2024
0.13.0 Feb 23, 2024
0.12.0 Dec 1, 2023
0.1.1 Mar 13, 2018

#59 in Biology

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338 downloads per month
Used in jam-rs

BSD-3-Clause

405KB
10K SLoC

sourmash

🦀 Rust API Documentation on docs.rs build-status codecov License: 3-Clause BSD


Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.

This is the core library used by sourmash. It exposes a C API that can be called from FFI in other languages, and it is how we use it in Python for building the sourmash application (CLI and Python API).


sourmash is a product of the Lab for Data-Intensive Biology at the UC Davis School of Veterinary Medicine.

Support

Please ask questions and files issues on Github.

Development

Development happens on github at sourmash-bio/sourmash.

Minimum supported Rust version

Currently the minimum supported Rust version is 1.65.0.

Dependencies

~10–19MB
~344K SLoC