9 breaking releases

0.11.0 Jul 8, 2021
0.10.0 Oct 8, 2020
0.9.0 Jul 14, 2020
0.5.0 Feb 9, 2020
0.1.1 Mar 13, 2018

#62 in Science

31 downloads per month

BSD-3-Clause

275KB
7K SLoC

sourmash

🦀 Rust API Documentation on docs.rs build-status codecov License: 3-Clause BSD


Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.

This is the core library used by sourmash. It exposes a C API that can be called from FFI in other languages, and it is how we use it in Python for building the sourmash application (CLI and Python API).


sourmash is a product of the Lab for Data-Intensive Biology at the UC Davis School of Veterinary Medicine.

Support

Please ask questions and files issues on Github.

Development

Development happens on github at dib-lab/sourmash.

Minimum supported Rust version

Currently the minimum supported Rust version is 1.42.0.

Dependencies

~5–8.5MB
~178K SLoC