14 releases (breaking)
0.13.1 | Mar 23, 2024 |
---|---|
0.12.1 | Feb 10, 2024 |
0.12.0 | Dec 1, 2023 |
0.11.0 | Jul 8, 2021 |
0.1.1 | Mar 13, 2018 |
#50 in Biology
384 downloads per month
Used in jam-rs
395KB
10K
SLoC
sourmash
Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
This is the core library used by sourmash. It exposes a C API that can be called from FFI in other languages, and it is how we use it in Python for building the sourmash application (CLI and Python API).
sourmash is a product of the Lab for Data-Intensive Biology at the UC Davis School of Veterinary Medicine.
Support
Please ask questions and files issues on Github.
Development
Development happens on github at sourmash-bio/sourmash.
Minimum supported Rust version
Currently the minimum supported Rust version is 1.65.0.
Dependencies
~10–19MB
~345K SLoC