#nucleotide #fasta #tui #bioinformatics #count

app tarnished

Very simple CLI app for testing the percent of nucleotides in FASTA files

4 releases (breaking)

0.4.0 Jan 9, 2023
0.3.0 Jan 6, 2023
0.2.0 Jan 5, 2023
0.1.0 Jan 5, 2023

#9 in #nucleotide

33 downloads per month

GPL-3.0-only

150KB
336 lines

Tarnished

Simple TUI app for check the nucleotide percentage in each fasta file.

I don't know what more.

Installation

With cargo:

cargo install tarnished

Locally:

  • Clone this repo and cd into it. Then:
cargo install --path .
  • Copy exec from target/release to some dir in PATH

Usage

Help

Tarnished 0.1.0
Miłosz Chodkowski
App for testing the nucleotide abundance in fasta files

USAGE:
    tarnished <files>...

FLAGS:
    -h, --help       Prints help information
    -V, --version    Prints version information

ARGS:
    <files>...    files in fasta format ending with [.fa | .fna | .fasta]

Command

>>> tarnished *.fna

Result

Example

License

  • GPLv3

Dependencies

~17–29MB
~417K SLoC