18 releases
0.1.18 | Aug 1, 2023 |
---|---|
0.1.17 | Jul 28, 2023 |
0.1.13 | Jun 19, 2023 |
0.1.4 | Apr 28, 2023 |
#50 in Biology
106 downloads per month
60KB
1K
SLoC
Stats of gff3 files
Install :
cargo install stats_on_gff3
Crates: https://crates.io/crates/stats_on_gff3
Examples:
stats_on_gff3 --precision 1000 Homo_sapiens.GRCh38.109.chromosome.1.gff3 Homo_sapiens.GRCh38.dna.chromosome.1.fa 2>err
stats_on_gff3 --all Homo_sapiens.GRCh38.109.chromosome.1.gff3 Homo_sapiens.GRCh38.dna.chromosome.1.fa 2>err
zcat Ciona_savignyi.CSAV2.0.dna.toplevel.fa.gz | stats_on_gff3 --precision 100 Ciona_savignyi.CSAV2.0.109.gff3 stdin 2> err
Dependencies
~17MB
~306K SLoC