#k-mer #content #unitigs

app verify-same-kmer-content

Verify that an SPSS has the same kmer content as a set of unitigs

10 stable releases

1.4.1 Dec 12, 2024
1.3.1 Oct 27, 2023
1.1.1 Jan 24, 2023
1.0.2 Aug 16, 2022

#22 in Biology

Download history 259/week @ 2024-12-08 19/week @ 2024-12-15 1/week @ 2025-02-09 1/week @ 2025-02-16

652 downloads per month

BSD-2-Clause

44KB
953 lines

Verify same kmer content

Verify that two files with genomic sequences (GFA or fasta) have the same kmer content.

Dependencies

~3–11MB
~105K SLoC