30 releases (10 breaking)

0.11.1 Jan 11, 2025
0.11.0 Dec 20, 2024
0.10.0 Dec 12, 2024
0.9.0 Nov 29, 2024

#97 in Biology

Download history 737/week @ 2024-11-16 1018/week @ 2024-11-23 740/week @ 2024-11-30 991/week @ 2024-12-07 275/week @ 2024-12-14 68/week @ 2024-12-21 32/week @ 2024-12-28 82/week @ 2025-01-04 204/week @ 2025-01-11

506 downloads per month
Used in 5 crates

MIT license

96KB
2.5K SLoC

common kits

  • gsbam: bam related kits
  • fastx_reader: fasta/fastq reader
  • file_reader: bed and vcf reader
  • pbar: progress bar
  • samtools: call samtools shell command
  • dna: dna utils
  • phreq: phreq and quality utils

ChangeLog

0.9.0

0.8.6

    • phreq.rs
    • gsbam::build_pg_header, gsbam::read_bam
    • ds::name2idx_and_seq, ds::name2seq, ds::idx2name_and_seq

0.8.2

  • compute_qend

Dependencies

~27–39MB
~631K SLoC