4 releases
0.1.3 | Jul 4, 2024 |
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0.1.2 | Jul 4, 2024 |
0.1.1 | Jul 3, 2024 |
0.1.0 | Jul 3, 2024 |
#226 in Biology
22KB
122 lines
Split a fasta file into several fasta files
https://crates.io/crates/fasta_split
https://github.com/simonpenel/fasta_split/
Install
cargo install fasta_split
Usage
Usage: fasta_split [OPTIONS] <FASTA_FILE> <FAM_FILE>
Arguments:
<FASTA_FILE> FASTA INPUT (file path or stdin)
<FAM_FILE> FAM_FILE INPUT (file path)
Options:
--orphans Include orphan families
-h, --help Print help
-V, --version Print version
Family file format
A tabular file:
FAM1 seqname2
FAM1 seqname3
FAM1 seqname4
...
FAM10 seqname101
FAM10 seqname102
FAM10 seqname103
FAM10 seqname104`
Dependencies
~18MB
~318K SLoC