13 releases (4 breaking)

0.9.3 Feb 9, 2024
0.9.2 Feb 9, 2024
0.8.6 Jan 29, 2024
0.7.1 Jan 11, 2024
0.5.5 Dec 18, 2023

#71 in Biology

Download history 63/week @ 2023-12-17 3/week @ 2023-12-24 89/week @ 2023-12-31 223/week @ 2024-01-07 35/week @ 2024-01-14 373/week @ 2024-01-21 297/week @ 2024-01-28 301/week @ 2024-02-04 102/week @ 2024-02-11

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Used in exon

Apache-2.0

87KB
1.5K SLoC

Exon

Exon is an analysis toolkit for life-science applications. It features:

  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support
  • SQL based access to bioinformatics data -- general DML and some DDL support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~46–61MB
~1M SLoC