Lib.rs

› Parser implementations | Science › Biology › Exon
#bioinformatics #data #exon #proteomics #data-file #file-format #arrow

exon-mzml

Exon MzML

by Trent Hauck

32 releases (15 breaking)

new 0.20.0 Apr 24, 2024
0.18.0 Apr 23, 2024
0.15.0 Mar 27, 2024
0.5.5 Dec 18, 2023

#3 in #proteomics

Download history 43/week @ 2024-01-03 117/week @ 2024-01-10 14/week @ 2024-01-17 258/week @ 2024-01-24 79/week @ 2024-01-31 143/week @ 2024-02-07 40/week @ 2024-02-14 270/week @ 2024-02-21 578/week @ 2024-02-28 607/week @ 2024-03-06 382/week @ 2024-03-13 133/week @ 2024-03-20 219/week @ 2024-03-27 78/week @ 2024-04-03 178/week @ 2024-04-10 1086/week @ 2024-04-17

1,571 downloads per month
Used in exon

Apache-2.0

82KB
1.5K SLoC

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~48–64MB
~1.5M SLoC