Lib.rs

› Parser implementations | Science › Biology › Exon
#bioinformatics #data #exon #proteomics #data-file #file-format #arrow

exon-mzml

Exon MzML

by Trent Hauck and 2 contributors

48 releases (24 breaking)

0.29.1 Jul 16, 2024
0.28.1 Jul 15, 2024
0.15.0 Mar 27, 2024
0.5.5 Dec 18, 2023

#1738 in Parser implementations

Download history 127/week @ 2024-04-04 604/week @ 2024-04-11 1279/week @ 2024-04-18 299/week @ 2024-04-25 80/week @ 2024-05-02 36/week @ 2024-05-09 501/week @ 2024-05-16 815/week @ 2024-05-23 401/week @ 2024-05-30 68/week @ 2024-06-06 645/week @ 2024-06-13 313/week @ 2024-06-20 47/week @ 2024-06-27 25/week @ 2024-07-04 554/week @ 2024-07-11 142/week @ 2024-07-18

796 downloads per month
Used in exon

Apache-2.0

82KB
1.5K SLoC

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~65MB
~1.5M SLoC