Lib.rs

› Parser implementations | Science › Biology › Exon
#exon #bioinformatics #proteomics #arrow #data #local-filesystem #object-storage

exon-common

Common utilities for Exon

by Trent Hauck

53 releases (17 breaking)

new 0.20.0 Apr 24, 2024
0.18.0 Apr 23, 2024
0.15.0 Mar 27, 2024
0.5.5 Dec 18, 2023
0.5.3 Nov 29, 2023

#2 in #proteomics

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Used in 18 crates (15 directly)

Apache-2.0

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Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

lib.rs:

Common utilities for Exon.

Dependencies

~61MB
~1M SLoC