Lib.rs

› Parser implementations | Science › Biology › Exon
#bioinformatics #exon #vcf #arrow #data #proteomics #primitive

exon-vcf

Exon VCF

by Trent Hauck

32 releases (15 breaking)

new 0.20.0 Apr 24, 2024
0.18.0 Apr 23, 2024
0.15.0 Mar 27, 2024
0.5.5 Dec 18, 2023

#2397 in Parser implementations

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1,602 downloads per month
Used in 4 crates (2 directly)

Apache-2.0

78KB
1.5K SLoC

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~69MB
~1.5M SLoC