#fastq #bioinformatics #metagenomics #kraken #taxonomy

app krakenxtract

Extract reads from a FASTQ file based on taxonomic classification via Kraken2

1 unstable release

0.4.0 Oct 6, 2023
0.3.1 Oct 5, 2023
0.3.0 Sep 22, 2023
0.2.3 Sep 4, 2023

#212 in Biology

45 downloads per month

MIT license

200KB
568 lines

krakenXtract

Renamed to kractor:

https://github.com/Sam-Sims/kractor

https://crates.io/crates/kractor

Dependencies

~8–11MB
~181K SLoC