3 releases
| 0.1.2 | Aug 7, 2022 |
|---|---|
| 0.1.1 | Aug 6, 2022 |
| 0.1.0 | Apr 24, 2022 |
#314 in Biology
19KB
84 lines
Calculates Per-Read and Total Sequence Complexity from FastQ file.
Installation
Source
Download the source code and run
cargo install
Usage
seqcomplexity -q path/to/sequence.fastq
Arguments:
| Parameter | Default | Description |
|---|---|---|
| -q --fastq | - | The path to the FASTQ file to use |
| -p, --per-read | false | Report complexity per read |
Dependencies
~25–35MB
~618K SLoC