#vcf #port #access #read #read-only #genetic #biocommons-seqrepo

seqrepo

Port of (read-only) functionality of biocommons/seqrepo to Rust

17 releases (9 breaking)

0.10.2 Jun 10, 2024
0.10.1 Mar 7, 2024
0.10.0 Feb 8, 2024
0.9.0 Nov 7, 2023
0.3.0 Mar 31, 2023

#3 in #read-only

Download history 264/week @ 2024-03-03 439/week @ 2024-03-10 27/week @ 2024-03-17 48/week @ 2024-03-24 51/week @ 2024-03-31 13/week @ 2024-04-07 1/week @ 2024-04-14 4/week @ 2024-04-28 1/week @ 2024-05-05 1/week @ 2024-05-12 26/week @ 2024-05-26 43/week @ 2024-06-02 244/week @ 2024-06-09 105/week @ 2024-06-16

418 downloads per month
Used in 3 crates (2 directly)

Apache-2.0

47KB
947 lines

Crates.io Crates.io Crates.io CI codecov DOI

seqrepo-rs

This is a port of biocommons/seqrepo to the Rust programming language.

At the moment, only read access has been implemented. For downloading etc., you will have to use the Python package.

Running the CLI Example

The library ships with an example called cli that you can use to query a seqrepo.

# cargo run --example cli -- --help

Dependencies

~0.6–5MB
~98K SLoC