#vcf #port #access #read #read-only #genetic #biocommons-seqrepo

seqrepo

Port of (read-only) functionality of biocommons/seqrepo to Rust

16 releases (9 breaking)

0.10.1 Mar 7, 2024
0.9.0 Nov 7, 2023
0.7.0 Jul 6, 2023
0.3.0 Mar 31, 2023

#92 in Biology

Download history 24/week @ 2023-11-23 15/week @ 2023-11-30 1/week @ 2023-12-07 7/week @ 2023-12-14 1/week @ 2023-12-21 5/week @ 2024-01-04 47/week @ 2024-01-18 5/week @ 2024-01-25 7/week @ 2024-02-01 71/week @ 2024-02-08 40/week @ 2024-02-15 155/week @ 2024-02-22 121/week @ 2024-02-29 523/week @ 2024-03-07

839 downloads per month
Used in 3 crates (2 directly)

Apache-2.0

47KB
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Crates.io Crates.io Crates.io CI codecov DOI

seqrepo-rs

This is a port of biocommons/seqrepo to the Rust programming language.

At the moment, only read access has been implemented. For downloading etc., you will have to use the Python package.

Running the CLI Example

The library ships with an example called cli that you can use to query a seqrepo.

# cargo run --example cli -- --help

Dependencies

~0.6–5MB
~95K SLoC