#port #read-only #wrapper #sequencing #dna #biological-sequence

seqrepo

Port of (read-only) functionality of biocommons/seqrepo to Rust

9 releases (4 breaking)

new 0.5.1 Jun 6, 2023
0.5.0 May 23, 2023
0.4.0 Apr 24, 2023
0.3.0 Mar 31, 2023
0.1.2 Feb 16, 2023
Download history 21/week @ 2023-02-14 46/week @ 2023-02-21 68/week @ 2023-02-28 42/week @ 2023-03-07 30/week @ 2023-03-14 44/week @ 2023-03-21 133/week @ 2023-03-28 65/week @ 2023-04-04 14/week @ 2023-04-11 126/week @ 2023-04-18 23/week @ 2023-04-25 18/week @ 2023-05-02 75/week @ 2023-05-09 45/week @ 2023-05-16 556/week @ 2023-05-23 90/week @ 2023-05-30

766 downloads per month
Used in 3 crates (2 directly)

Apache-2.0

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seqrepo-rs

This is a port of biocommons/seqrepo to the Rust programming language.

At the moment, only read access has been implemented. For downloading etc., you will have to use the Python package.

Running the CLI Example

The library ships with an example called cli that you can use to query a seqrepo.

# cargo run --example cli -- --help

Dependencies

~23MB
~436K SLoC