58 releases (36 stable)
new 12.3.0 | May 6, 2025 |
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12.2.0 | Mar 6, 2025 |
11.1.1 | Jan 21, 2025 |
11.0.0 | Nov 18, 2024 |
0.1.0-alpha.6 | Jul 22, 2020 |
#127 in Biology
369 downloads per month
Used in 11 crates
(5 directly)
135KB
3K
SLoC
This crate abstracts over the representation of a genome string, allowing for different implementations that are catered to different use-cases.
Compact Genome
A Rust crate to represent a genome string in memory.
The crate defines trait abstractions over a genome string, and provides different compact implementations. At the moment, a bitpacked representation along with a basic ASCII representation of the base characters are supported.
Dependencies
~1.6–2.4MB
~52K SLoC