30 releases (8 stable)

2.1.1 Aug 1, 2023
1.3.1 May 24, 2023
1.2.1 Nov 17, 2022
1.1.0 Jun 1, 2022
0.1.0-alpha.6 Jul 22, 2020

#162 in Biology

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87 downloads per month
Used in 3 crates (via genome-graph)

BSD-2-Clause

73KB
1.5K SLoC

Compact Genome

A Rust crate to represent a genome string in memory.

The crate defines trait abstractions over a genome string, and provides different compact implementations. At the moment, only the basic ASCII representation of the base characters is supported though.


lib.rs:

This crate abstracts over the representation of a genome string, allowing for different implementations that are catered to different use-cases.

Dependencies

~2MB
~50K SLoC