#bioinformatics #file-format #biological #routine #tasks #unified #interface

bin+lib bioform

Tools for sniffing, parsing, and manipulating common biological file formats

1 unstable release

0.1.0 Oct 4, 2024

#1591 in Parser implementations

Download history 146/week @ 2024-09-30 14/week @ 2024-10-07 14/week @ 2024-10-14

174 downloads per month

Apache-2.0

34KB
620 lines

bioform

Routine bioinformatic tasks made simple.

bioform can automatically detects common biological file formats and wraps them in a unified interface that supports many routine bioinformatic tasks.

TODO:
- matrix comparing supported formats and operations

This project is in early development and subject to API-breaking changes until its 1.0.0 release sometime in 2025.

License

This project is licensed under the Apache License, Version 2.0. See LICENSE or visit http://www.apache.org/licenses/LICENSE-2.0 for details.

Dependencies

~6–13MB
~146K SLoC