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#rna-seq #single-cell #atac-seq #experiment

sce

A library for importing and managing various single-cell matrices

Owned by Rob Patro, Avi Srivastava.

4 releases

0.2.0 Jun 29, 2023
0.1.2 May 10, 2022
0.1.1 Jul 9, 2021
0.1.0 Jul 8, 2021

#500 in Biology

Download history 41/week @ 2024-12-16 22/week @ 2024-12-23 5/week @ 2024-12-30 6/week @ 2025-01-06 8/week @ 2025-01-13 8/week @ 2025-01-20 12/week @ 2025-01-27 12/week @ 2025-02-03 1/week @ 2025-02-10 16/week @ 2025-02-17 38/week @ 2025-02-24 49/week @ 2025-03-03 10/week @ 2025-03-10 11/week @ 2025-03-17 14/week @ 2025-03-24 18/week @ 2025-03-31

53 downloads per month
Used in 2 crates (via alevin-fry)

Custom license

36KB
915 lines

SingleCellExperiment Coverage Status Rust

Oxidized Single Cell Experiment (analogous to R version) class for importing and managing various single cell matrices.

Dependencies

~6.5MB
~119K SLoC