10 releases

0.3.1 Jul 23, 2022
0.3.0 May 21, 2022
0.3.0-beta.2 Mar 30, 2022
0.2.2 Sep 24, 2020
0.1.0 Jul 7, 2020

#1132 in Parser implementations

Download history 31/week @ 2024-02-20 28/week @ 2024-02-27

59 downloads per month
Used in entab-cli

MIT license

6.5MB
7K SLoC

Contains (Cab file, 9KB) 192_1.stg

Entab

This is the main file parsing library and includes support for compression/ decompression, file type inference, and parsers for different file types.

Usage

To parse the IDs out of a FASTA file:

//! use std::fs::File;
//! use entab::readers::fasta::{FastaReader, FastaRecord};
//!
//! let file = File::open("./tests/data/sequence.fasta")?;
//! let mut reader = FastaReader::new(file, None)?;
//! while let Some(FastaRecord { id, .. }) = reader.next()? {
//!     println!("{}", id);
//! }

Other Parsers

Aston - Python - Agilent Chemstation & Masshunter/Thermo DXF/Inficon/etc Chromatography Toolbox - Matlab - Agilent/Thermo/NetCDF/mzXML Isoreader - R - Isodat Unfinnigan - Perl/Python - Thermo RAW seqio - Rust - FASTX

Please let me know if there are others that you find useful that should be added to this list.

Dependencies

~4–6MB
~96K SLoC