Lib.rs

› Parser implementations › Exon
#bioinformatics #exon #data #file-format #data-file #sql #big-wig

exon-bigwig

Subcrate of the exon crate for working with BigWig files

by Trent Hauck

12 releases (4 breaking)

0.20.0 Apr 24, 2024
0.19.1 Apr 23, 2024
0.18.0 Apr 23, 2024
0.17.0 Apr 22, 2024
0.16.6 Apr 19, 2024

#1007 in Parser implementations

Download history 442/week @ 2024-04-14 825/week @ 2024-04-21 32/week @ 2024-04-28

1,299 downloads per month
Used in exon

Apache-2.0

45KB
829 lines

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~65MB
~1.5M SLoC