Lib.rs

Issues found

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• gen

  • Dependency noodles 0.85.0 is significantly outdated

    Upgrade to 0.91.0 to get all the fixes, and avoid causing duplicate dependencies in projects.

    In Cargo, different 0.x versions are considered incompatible, so this is a semver-major upgrade.

    noodles versions

  • Published crate doesn't match its repository

    Verified 58 out of 59 files (includes 2 Cargo-generated).

    Files in the crates.io crate compared to the repository:

    • Cargo.toml.orig does not match the repository.

    Fetched https://github.com/ginkgobioworks/gen.git tagged nightly (20757ac699d7772ff5ea354ebffe2d34f1a01a6e).

    Checked on 2025-01-26

    This check is experimental.

    Forum thread

  • Dependency convert_case 0.6.0 is a bit outdated

    Consider upgrading to 0.7.1 to get all the fixes and improvements.

    convert_case versions

  • Dependency interavl 0.2.0 is slightly outdated

    Consider upgrading to 0.3.0 to get all the fixes and improvements.

    interavl versions

  • Dependency itertools 0.13.0 is outdated

    Upgrade to 0.14.0 to get all the fixes, and avoid causing duplicate dependencies in projects.

    itertools versions

  • Dependency petgraph 0.6.5 is a bit outdated

    Consider upgrading to 0.7.1 to get all the fixes and improvements.

    petgraph versions

  • Dependency rusqlite 0.32.1 is outdated

    Upgrade to 0.33.0 to get all the fixes, and avoid causing duplicate dependencies in projects.

    rusqlite versions

  • Dependency ruzstd 0.7.3 is outdated

    Upgrade to 0.8.0 to get all the fixes, and avoid causing duplicate dependencies in projects.

    ruzstd versions

  • Dependency thiserror 1.0.69 is a bit outdated

    Consider upgrading to 2.0.11 to get all the fixes and improvements.

    Easy way to bump dependencies: cargo install cargo-edit; cargo upgrade -i; Also check out Dependabot service on GitHub.

    thiserror versions

  • Missing categories

    Categories improve browsing of lib.rs and crates.io. Add categories = ["science"] to the Cargo.toml.

    Even if there are no categories that fit precisely, pick one that is least bad. You can also propose new categories in crates.io issue tracker.

    List of available categories

  • Missing keywords

    Help users find your crates. Add keywords = ["sequence", "graph", "node", "edge", "segment"] (up to 5) to the Cargo.toml. Best keywords are alternative terms or their spellings that aren't in the name or description. Also add a keyword that precisely categorizes this crate and groups it with other similar crates.

If some of these crates are unmaintained and shouldn't be checked, yank them or add [badges.maintenance]
status = "deprecated" to their Cargo.toml.