#sequence-alignment #biological #model #markov #hidden #profile #phmm

nale

Nale is a library that performs profile Hidden Markov Model (PHMM) biological sequence alignment

3 releases

0.1.2 Dec 18, 2023
0.1.1 Apr 16, 2023
0.1.0 Apr 15, 2023

#108 in Biology

Download history 22/week @ 2024-02-14 23/week @ 2024-02-21 16/week @ 2024-02-28 4/week @ 2024-03-13 18/week @ 2024-03-27 35/week @ 2024-04-03

53 downloads per month

BSD-3-Clause

250KB
5K SLoC

nale

DEPRECATED

We have decided to restructure this project in a way that includes renaming this crate.

Moving forward, you can instead use the libnail crate.

License

Nale is licensed under the BSD-3-Clause license.

See LICENSE for details.

Authors

Jack Roddy - jroddy@arizona.edu

Dependencies

~4–6MB
~108K SLoC